Preheat oven to 400 degrees.
Combine flours, sugar, salt, nutmeg, and cinnamon in a large bowl.
Cut in the coconut oil and add the applesauce. Mix
Add in zucchini and quick oats and mix until everything is well-combined and not crumbly.
Fold in the chocolate chips.
Put spoonfuls of cookie dough on a prepared cookie sheet or silpat. Bake for 8-10 minutes.
Let cool on cookie sheet for a few minutes, and then transfer to cooling rack.